SubtiBank SubtiBank
yoeA [2019-06-07 10:52:24]
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yoeA [2019-06-07 10:52:24]

probable multidrug resistance protein
locus
BSU18370
pI
10.00
mw
51.12 kDa
protein length
463 aa Sequence Blast
gene length
1392 bp Sequence Blast
function
unknown
product
putative multidrug exporter
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.15|Multidrug exporters/ based on homology]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    2,000,960 2,002,351

    The protein

    Protein family

  • [SW|MOP exporter family]

    • Structure

  • [PDB|3VVO] (MATE multidrug exporter from Pyrococcus furiosus, 25% identity) [pubmed|23535598]

    • Expression and Regulation

    Operons

    genes
    [gene|3A45214C724902530D9808D41EDA20AFF71D1D59|yoeA]
    description
    [Pubmed|22383849]

    additional information

  • An [ncRNA|search|antisense RNA] is predicted for '[protein|search|yoeA]' [PubMed|20525796]
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    Biological materials

    Mutant

  • BKE18370 ([gene|3A45214C724902530D9808D41EDA20AFF71D1D59|yoeA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTAAAGGACTCCTTTA, downstream forward: _UP4_TAGCCTCCGAATCACACCGT
  • BKK18370 ([gene|3A45214C724902530D9808D41EDA20AFF71D1D59|yoeA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTAAAGGACTCCTTTA, downstream forward: _UP4_TAGCCTCCGAATCACACCGT

    • References

  • 20525796,22383849,23535598